{"id":283,"date":"2022-12-20T10:47:08","date_gmt":"2022-12-20T01:47:08","guid":{"rendered":"http:\/\/w3.genome.med.kyoto-u.ac.jp\/en\/?page_id=283"},"modified":"2022-12-27T10:43:56","modified_gmt":"2022-12-27T01:43:56","slug":"home-2014","status":"publish","type":"page","link":"https:\/\/w3.genome.med.kyoto-u.ac.jp\/en\/home-2014\/","title":{"rendered":"Home 2014"},"content":{"rendered":"\n<p><strong><big>The Second Kyoto Course and Symposium on Bioinformatics for Next Generation Sequencing with Applications in Human Genetics \u2013 March 10<sup>th<\/sup>-14<sup>th<\/sup>, 2014<\/big><\/strong><\/p>\n\n\n\n<p><strong>Training course:<\/strong><\/p>\n\n\n\n<p><em><strong>Date:<\/strong>\u00a0Monday, March 10<sup>th<\/sup>\u00a0\u2013 Wednesday, March 12<sup>th<\/sup>, 2014<\/em><\/p>\n\n\n\n<p><strong><em>Venue:<\/em><\/strong><br><em>Seminar Room (1st floor), South Research Bldg.,<br>Kyoto University Graduate School of Medicine<br>53 Shogoin Kawahara-cho, Sakyo-ku, Kyoto 606-8507, Japan<\/em><\/p>\n\n\n\n<p><em><strong>Description:<\/strong><br>The 3-day course will provide a practical introduction to analysis of next generation sequencing data from handling of raw data to applications in study of human disease. As example of analysis techniques, methods to examine exomic sequence and RNA-seq data will be covered in depth. We will illustrate the use of sequence data in combination with methods for mapping disease genes in genetic studies.<\/em><\/p>\n\n\n\n<p><em><strong>Topics:<\/strong><br>Introduction to Human Genetics<br>Basics of Data Manipulation<\/em><br><em>Variant Calling and Annotation (SNV, CNV)<br>Statistical Tests<br>Methods for Complex Analysis<\/em><\/p>\n\n\n\n<p><strong><em>Course instructors:<\/em><\/strong><br><em>Peter Carbonetto, University of Chicago<br>Richard Houlston, Institute of Cancer Research, UK<br>Mark Lathrop, McGill University, Canada<br>Suzanne Leal, Baylor College of Medicine, USA<br>Louis Letourneau, McGill University, Canada<br>Jacek Majewski, McGill University, Canada<br>Jurg Ott, Chinese Academy of Sciences, PRC and Rockefeller University, USA<br>Pak Chung Sham, University of Hong Kong, Hong Kong<br>Joseph D. Terwilliger, Columbia University, USA<br>Daniel E. Weeks, University of Pittsburgh, USA<\/em><\/p>\n\n\n\n<p><strong><em>Attendees:<\/em><\/strong><br><em>The course is aimed principally at advanced doctoral students or post-doctoral researchers who need to apply next-generation sequencing in medical studies. As places will be limited, applicants will be selected based on a description of their background and future research projects to be submitted when applying for the course.<br>The number of attendees will be limited up to approximately 40.<\/em><\/p>\n\n\n\n<p><strong><em>Registration fee:<\/em><\/strong><br><em>1) Academic: 50,000 yen<br>2) Non-academic: 100,000 yen<\/em><\/p>\n\n\n\n<p><strong>Symposium:<\/strong><\/p>\n\n\n\n<p><em><strong>Date:<\/strong>\u00a0Thursday, March 13<sup>th<\/sup>\u00a0\u2013 Friday, March 14<sup>th<\/sup>, 2014<\/em><\/p>\n\n\n\n<p><strong>Venue:<\/strong><br><em>The Continental Room (3rd floor), Fortune Garden Kyoto<\/em><br><em>386-2 Ichino Funairi-cho, Nakagyo-ku, Kyoto 604-0924, Japan<\/em><\/p>\n\n\n\n<p><strong><em>Description:<\/em><\/strong><br><em>The course will be followed by 2-day symposium with invited international speakers to provide perspectives on recent advances in medical genomics. The symposium will be open to the course attendees and others from the scientific community.<\/em><\/p>\n\n\n\n<p><em><strong>Symposium speakers:<\/strong><br>Peter Carbonetto, University of Chicago, USA<\/em><br><em>Mark Caulfield, Queen Mary University of London, UK<br>Richard Houlston, Institute of Cancer Research, UK<br>Maricel G. Kann, University of Maryland, USA<br>Jong-Il Kim, Seoul National University, Korea<br>Mark Lathrop, McGill University, Canada<br>Suzanne Leal, Baylor College of Medicine, USA<br>Jacek Majewski, McGill University, Canada<br>Fumihiko Matsuda, Kyoto University, Japan<br>Yukinori Okada, Tokyo Medical and Dental University, Japan<br>Jurg Ott, Chinese Academy of Sciences, PRC &amp; Rockefeller University, USA<br>Pak Chung Sham, University of Hong Kong, Hong Kong<br>Chen-Yang Shen, Taiwan Biobank, Taiwan<br>Shamil R. Sunyaev, Harvard University, USA<br>Makoto M. Taketo, Kyoto University, Japan<br>Joseph D. Terwilliger, Columbia University, USA<br>Daniel E. Weeks, University of Pittsburgh, USA<\/em><\/p>\n\n\n\n<p><em><strong>Registration:<\/strong><br>Admission free but advanced registration is recommended.<br><a href=\"http:\/\/www.genome.med.kyoto-u.ac.jp:8080\/ngs_symposium\"><u>Symposium registration<\/u><\/a><\/em><\/p>\n\n\n\n<p><strong>Organizers:<\/strong><\/p>\n\n\n\n<figure class=\"wp-block-table\"><table><tbody><tr><td>Mark Lathrop<\/td><td>McGill University, Canada<\/td><\/tr><tr><td>Jurg Ott<\/td><td>Chinese Academy of Sciences, PRC and Rockefeller University, USA<\/td><\/tr><tr><td>Daniel E. Weeks<\/td><td>University of Pittsburgh, USA<\/td><\/tr><tr><td>Fumihiko Matsuda<\/td><td>Kyoto University, Japan<\/td><\/tr><\/tbody><\/table><\/figure>\n\n\n\n<p><strong>For inquiry:<\/strong>Center for Genomic Medicine, Kyoto University<br>ngs_course@genome.med.kyoto-u.ac.jp<\/p>\n","protected":false},"excerpt":{"rendered":"<p>The Second Kyoto Course and Symposium on Bioinformatics for Next Generation Sequencing with Applications in Human Genetics \u2013 March 10th-14th, 2014 Training course: Date:\u00a0Monday, March 10th\u00a0\u2013 Wednesday, March 12th, 2014 Venue:Seminar Room (1st floor), South Research Bldg.,Kyoto University Graduate School of Medicine53 Shogoin Kawahara-cho, Sakyo-ku, Kyoto 606-8507, Japan Description:The 3-day course will provide a practical&#8230;<\/p>\n","protected":false},"author":1,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"tags":[],"class_list":["post-283","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/w3.genome.med.kyoto-u.ac.jp\/en\/wp-json\/wp\/v2\/pages\/283","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/w3.genome.med.kyoto-u.ac.jp\/en\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/w3.genome.med.kyoto-u.ac.jp\/en\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/w3.genome.med.kyoto-u.ac.jp\/en\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/w3.genome.med.kyoto-u.ac.jp\/en\/wp-json\/wp\/v2\/comments?post=283"}],"version-history":[{"count":4,"href":"https:\/\/w3.genome.med.kyoto-u.ac.jp\/en\/wp-json\/wp\/v2\/pages\/283\/revisions"}],"predecessor-version":[{"id":413,"href":"https:\/\/w3.genome.med.kyoto-u.ac.jp\/en\/wp-json\/wp\/v2\/pages\/283\/revisions\/413"}],"wp:attachment":[{"href":"https:\/\/w3.genome.med.kyoto-u.ac.jp\/en\/wp-json\/wp\/v2\/media?parent=283"}],"wp:term":[{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/w3.genome.med.kyoto-u.ac.jp\/en\/wp-json\/wp\/v2\/tags?post=283"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}