{"id":249,"date":"2022-12-20T10:29:58","date_gmt":"2022-12-20T01:29:58","guid":{"rendered":"http:\/\/w3.genome.med.kyoto-u.ac.jp\/en\/?page_id=249"},"modified":"2023-09-22T10:19:54","modified_gmt":"2023-09-22T01:19:54","slug":"course-2018-2","status":"publish","type":"page","link":"https:\/\/w3.genome.med.kyoto-u.ac.jp\/en\/course-2018-2\/","title":{"rendered":"Course 2018"},"content":{"rendered":"\n

The 6th Kyoto Course on Bioinformatics for Genomic Medicine
Course on Computational Genomics \u2013 October 2nd-5th, 2018 Preliminary Schedule<\/big><\/strong><\/p>\n\n\n\n

Day 1 (October 2)<\/mark><\/strong><\/p>\n\n\n\n

9:00 \u2013 9:15 Opening remarks & course overviews <\/strong> Fumihiko Matsuda & Mark Lathrop <\/p>\n\n\n\n

9:15 \u2013 10:45 Lecture: Introduction to human genetics <\/strong> Joseph D. Terwilliger<\/p>\n\n\n\n

10:45 \u2013 11:15 Coffee break<\/em><\/p>\n\n\n\n

11:15 \u2013 12:45 Lecture: Advances in SNP-array based genome-wide association study (GWAS) <\/strong> <\/p>\n\n\n\n

Yoichiro Kamatani<\/p>\n\n\n\n

12:45 \u2013 13:45 <\/em><\/strong> Lunch<\/em><\/p>\n\n\n\n

13:45 \u2013 15:15 Lecture: The UK Biobank resource for genetic epidemiology <\/strong> Jemma Hopewell<\/p>\n\n\n\n

15:15 \u2013 17:15 Practical: Genome-wide association studies <\/strong> Yoichiro Kamatani<\/p>\n\n\n\n

<\/p>\n\n\n\n

Day 2 (October 3)<\/mark><\/strong><\/p>\n\n\n\n

9:00 \u2013 11:00 Lecture: Recent advances in NGS technologies <\/strong> Ioannis Ragoussis<\/p>\n\n\n\n

11:00 \u2013 11:15 Coffee break<\/em><\/p>\n\n\n\n

11:15 \u2013 12:15 Lecture: De novo assembling of human genomes <\/strong> Changhoon Kim<\/p>\n\n\n\n

12:15 \u2013 13:15 Lunch<\/em><\/p>\n\n\n\n

13:15 \u2013 14:45 Lecture: Understanding NGS data analysis workflow <\/strong> Mathieu Bourgey<\/p>\n\n\n\n

14:45 \u2013 15:00 Coffee break<\/em><\/p>\n\n\n\n

15:00 \u2013 17:00 Practical: NGS data manipulation & variant calling (SNV, CNV) <\/strong> Mathieu Bourgey<\/p>\n\n\n\n

<\/p>\n\n\n\n

Day 3 (October 4)<\/mark><\/strong><\/p>\n\n\n\n

9:00 \u2013 10:30 Lecture: Cloud based tools for NGS analysis <\/strong> Mario Foglio<\/p>\n\n\n\n

10:30 \u2013 10:45 Coffee break<\/em><\/p>\n\n\n\n

10:45 \u2013 11:30 Lecture: GWAS in the age of NGS <\/strong> Yukinori Okada<\/p>\n\n\n\n

11:30 \u2013 12:15 Lecture: Human population genetics <\/strong> Ryan Hernandez<\/p>\n\n\n\n

12:15 \u2013 13:15 Lunch<\/em><\/p>\n\n\n\n

13:15 \u2013 14:45 Practical: Human population genetics <\/strong> Ryan Hernandez<\/p>\n\n\n\n

14:45 \u2013 15:00 <\/em><\/strong> Coffee break<\/em><\/p>\n\n\n\n

15:00 \u2013 17:30 Practical: Human population genetics <\/strong> Ryan Hernandez<\/p>\n\n\n\n

<\/p>\n\n\n\n

Day 4 (October 5)<\/mark><\/strong><\/p>\n\n\n\n

9:00 \u2013 10:00 Lecture: Principles of Mendelian randomization <\/strong> Kaitlin Wade<\/p>\n\n\n\n

10:00 \u2013 10:15 <\/em><\/strong>Coffee break<\/em><\/p>\n\n\n\n

10:15 \u2013 12:45 Practical: Mendelian randomization<\/strong> Kaitlin Wade<\/p>\n\n\n\n

12:45 \u2013 13:45 <\/em><\/strong> Lunch<\/em><\/p>\n\n\n\n

13:45 \u2013 14:45 Lecture: Analysis of RNA-seq and epigenetic data <\/strong> Guillaume Bourque<\/p>\n\n\n\n

14:45 \u2013 15:45 Lecture: Applications to the analysis of cancer <\/strong> Nada Jabado<\/p>\n","protected":false},"excerpt":{"rendered":"

The 6th Kyoto Course on Bioinformatics for Genomic MedicineCourse on Computational Genomics \u2013 October 2nd-5th, 2018 Preliminary Schedule Day 1 (October 2) 9:00 \u2013 9:15 Opening remarks & course overviews Fumihiko Matsuda & Mark Lathrop 9:15 \u2013 10:45 Lecture: Introduction to human genetics Joseph D. Terwilliger 10:45 \u2013 11:15 Coffee break 11:15 \u2013 12:45 Lecture:…<\/p>\n","protected":false},"author":1,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"tags":[],"class_list":["post-249","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/w3.genome.med.kyoto-u.ac.jp\/en\/wp-json\/wp\/v2\/pages\/249","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/w3.genome.med.kyoto-u.ac.jp\/en\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/w3.genome.med.kyoto-u.ac.jp\/en\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/w3.genome.med.kyoto-u.ac.jp\/en\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/w3.genome.med.kyoto-u.ac.jp\/en\/wp-json\/wp\/v2\/comments?post=249"}],"version-history":[{"count":8,"href":"https:\/\/w3.genome.med.kyoto-u.ac.jp\/en\/wp-json\/wp\/v2\/pages\/249\/revisions"}],"predecessor-version":[{"id":737,"href":"https:\/\/w3.genome.med.kyoto-u.ac.jp\/en\/wp-json\/wp\/v2\/pages\/249\/revisions\/737"}],"wp:attachment":[{"href":"https:\/\/w3.genome.med.kyoto-u.ac.jp\/en\/wp-json\/wp\/v2\/media?parent=249"}],"wp:term":[{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/w3.genome.med.kyoto-u.ac.jp\/en\/wp-json\/wp\/v2\/tags?post=249"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}